Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm25948-201ENSMUST00000175334 112 ntBASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm27430-201ENSMUST00000184585 107 ntBASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm44333-201ENSMUST00000197168 107 ntBASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh20Q8BIZ0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Gm13464-201ENSMUST00000119418 935 ntBASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Mir6956-201ENSMUST00000183598 62 ntBASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh20Q8BIZ0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Gm8749-201ENSMUST00000117737 331 ntBASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh20Q8BIZ0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms