Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Depdc1bQ8BH88 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Gm12882-201ENSMUST00000121696 517 ntBASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Mir7684-201ENSMUST00000183858 60 ntBASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Gm38294-201ENSMUST00000192831 381 ntBASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Depdc1bQ8BH88 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.21■□□□□ 0.02
Depdc1bQ8BH88 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Depdc1bQ8BH88 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Depdc1bQ8BH88 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.21■□□□□ 0.02
Depdc1bQ8BH88 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Depdc1bQ8BH88 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm14767-201ENSMUST00000121559 586 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm27989-201ENSMUST00000184721 107 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm29310-201ENSMUST00000185468 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21825-201ENSMUST00000185728 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm29109-201ENSMUST00000185895 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21896-201ENSMUST00000186520 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21873-201ENSMUST00000186728 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21794-201ENSMUST00000187056 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21880-201ENSMUST00000187275 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21826-201ENSMUST00000187451 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21198-201ENSMUST00000188393 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21749-201ENSMUST00000189343 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21901-201ENSMUST00000189568 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm29424-201ENSMUST00000189716 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm28599-201ENSMUST00000189838 694 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21867-201ENSMUST00000189917 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm29269-201ENSMUST00000190087 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21722-201ENSMUST00000190153 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm28423-201ENSMUST00000190701 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21899-201ENSMUST00000190745 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21910-201ENSMUST00000191163 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21849-201ENSMUST00000191571 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm28678-201ENSMUST00000191593 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm20910-201ENSMUST00000193268 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Gm21871-201ENSMUST00000194621 696 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Depdc1bQ8BH88 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Depdc1bQ8BH88 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms