Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trnp1Q80ZI1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trnp1Q80ZI1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gm14381-201ENSMUST00000122105 414 ntBASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gm2991-201ENSMUST00000173338 480 ntBASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gm38158-201ENSMUST00000194617 339 ntBASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trnp1Q80ZI1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm15770-201ENSMUST00000117498 584 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.59■□□□□ 0.09
Trnp1Q80ZI1 Gm12403-201ENSMUST00000121384 959 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms