Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Gm6244-201ENSMUST00000178732 841 ntBASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.11■□□□□ 0.17
Prpf40bQ80W14 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Mir125a-201ENSMUST00000083545 68 ntBASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Prpf40bQ80W14 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Prpf40bQ80W14 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Mir3102-201ENSMUST00000175555 104 ntBASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Gm37424-201ENSMUST00000191727 561 ntBASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.09■□□□□ 0.17
Prpf40bQ80W14 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Prpf40bQ80W14 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Prpf40bQ80W14 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Prpf40bQ80W14 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Prpf40bQ80W14 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Prpf40bQ80W14 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Prpf40bQ80W14 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms