Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Gm16215-201ENSMUST00000161990 637 ntBASIC14.45□□□□□ -0.1
Trim62Q80V85 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim62Q80V85 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim62Q80V85 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim62Q80V85 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.44□□□□□ -0.1
Trim62Q80V85 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.44□□□□□ -0.1
Trim62Q80V85 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim62Q80V85 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim62Q80V85 Gm27772-201ENSMUST00000184900 187 ntBASIC14.44□□□□□ -0.1
Trim62Q80V85 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Gm9797-201ENSMUST00000052902 613 ntBASIC14.44□□□□□ -0.1
Trim62Q80V85 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim62Q80V85 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim62Q80V85 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim62Q80V85 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim62Q80V85 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim62Q80V85 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.43□□□□□ -0.1
Trim62Q80V85 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim62Q80V85 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.43□□□□□ -0.1
Trim62Q80V85 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim62Q80V85 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim62Q80V85 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim62Q80V85 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim62Q80V85 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms