Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Gm13408-201ENSMUST00000119822 798 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 Gm13935-201ENSMUST00000121859 798 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Gm19459-201ENSMUST00000176240 835 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Mospd4-201ENSMUST00000180618 576 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Gm43094-201ENSMUST00000196549 921 ntBASIC11.74□□□□□ -0.53
Rif1Q6PR54 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rif1Q6PR54 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.73□□□□□ -0.53
Rif1Q6PR54 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.73□□□□□ -0.53
Rif1Q6PR54 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm25927-201ENSMUST00000175058 117 ntBASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm3890-201ENSMUST00000182416 207 ntBASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm18730-201ENSMUST00000218038 343 ntBASIC11.73□□□□□ -0.53
Rif1Q6PR54 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rif1Q6PR54 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rif1Q6PR54 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.72□□□□□ -0.53
Rif1Q6PR54 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.72□□□□□ -0.53
Rif1Q6PR54 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.72□□□□□ -0.53
Rif1Q6PR54 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.72□□□□□ -0.53
Rif1Q6PR54 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms