Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chd4Q6PDQ2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Olfr284-202ENSMUST00000206647 966 ntBASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chd4Q6PDQ2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chd4Q6PDQ2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chd4Q6PDQ2 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.89■□□□□ 0.46
Chd4Q6PDQ2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.89■□□□□ 0.46
Chd4Q6PDQ2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Gm27501-201ENSMUST00000183599 107 ntBASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Gm38158-201ENSMUST00000194617 339 ntBASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chd4Q6PDQ2 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Gm13786-201ENSMUST00000122371 333 ntBASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Gm6222-202ENSMUST00000182143 629 ntBASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms