Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col11a2Q64739 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col11a2Q64739 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col11a2Q64739 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Col11a2Q64739 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.54■□□□□ 0.24
Col11a2Q64739 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.54■□□□□ 0.24
Col11a2Q64739 Gm14130-201ENSMUST00000118417 987 ntBASIC16.54■□□□□ 0.24
Col11a2Q64739 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Col11a2Q64739 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Col11a2Q64739 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col11a2Q64739 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm13665-201ENSMUST00000120830 528 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm11978-201ENSMUST00000122315 466 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.53■□□□□ 0.24
Col11a2Q64739 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 AA914427-201ENSMUST00000193194 1166 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Col11a2Q64739 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.53■□□□□ 0.24
Col11a2Q64739 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.53■□□□□ 0.24
Col11a2Q64739 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.53■□□□□ 0.24
Col11a2Q64739 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col11a2Q64739 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a2Q64739 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a2Q64739 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.52■□□□□ 0.24
Col11a2Q64739 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a2Q64739 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a2Q64739 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col11a2Q64739 Gm14017-201ENSMUST00000121934 386 ntBASIC16.52■□□□□ 0.24
Col11a2Q64739 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.52■□□□□ 0.24
Col11a2Q64739 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.52■□□□□ 0.24
Col11a2Q64739 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
Col11a2Q64739 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.52■□□□□ 0.24
Col11a2Q64739 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col11a2Q64739 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.52■□□□□ 0.24
Col11a2Q64739 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.52■□□□□ 0.23
Col11a2Q64739 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col11a2Q64739 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Col11a2Q64739 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms