Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.75□□□□□ -0.21
VclQ64727 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VclQ64727 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.74□□□□□ -0.21
VclQ64727 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.74□□□□□ -0.21
VclQ64727 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VclQ64727 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VclQ64727 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VclQ64727 Gm27437-201ENSMUST00000183429 107 ntBASIC13.74□□□□□ -0.21
VclQ64727 Gm21470-201ENSMUST00000187680 696 ntBASIC13.74□□□□□ -0.21
VclQ64727 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.74□□□□□ -0.21
VclQ64727 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.74□□□□□ -0.21
VclQ64727 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.74□□□□□ -0.21
VclQ64727 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VclQ64727 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.74□□□□□ -0.21
VclQ64727 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VclQ64727 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Syt7-204ENSMUST00000223586 1344 ntBASIC13.73□□□□□ -0.21
VclQ64727 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.73□□□□□ -0.21
VclQ64727 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
VclQ64727 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.73□□□□□ -0.21
VclQ64727 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Gm24694-201ENSMUST00000180054 110 ntBASIC13.73□□□□□ -0.21
VclQ64727 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
VclQ64727 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.73□□□□□ -0.21
VclQ64727 Gm27663-201ENSMUST00000184839 110 ntBASIC13.73□□□□□ -0.21
VclQ64727 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Gm37714-201ENSMUST00000194742 342 ntBASIC13.73□□□□□ -0.21
VclQ64727 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VclQ64727 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.73□□□□□ -0.21
VclQ64727 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VclQ64727 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VclQ64727 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.72□□□□□ -0.21
VclQ64727 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VclQ64727 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VclQ64727 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VclQ64727 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
VclQ64727 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VclQ64727 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms