Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.65■□□□□ 0.42
Clcn1Q64347 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm8927-201ENSMUST00000181978 981 ntBASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm43371-201ENSMUST00000202838 1031 ntBASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm17794-201ENSMUST00000220252 955 ntBASIC17.65■□□□□ 0.42
Clcn1Q64347 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm3222-201ENSMUST00000071282 990 ntBASIC17.65■□□□□ 0.42
Clcn1Q64347 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clcn1Q64347 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.65■□□□□ 0.42
Clcn1Q64347 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clcn1Q64347 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clcn1Q64347 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.64■□□□□ 0.42
Clcn1Q64347 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clcn1Q64347 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.64■□□□□ 0.42
Clcn1Q64347 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clcn1Q64347 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Clcn1Q64347 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Gm11524-201ENSMUST00000119349 807 ntBASIC17.64■□□□□ 0.41
Clcn1Q64347 Gm13385-201ENSMUST00000121089 220 ntBASIC17.64■□□□□ 0.41
Clcn1Q64347 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Gm7287-201ENSMUST00000205267 602 ntBASIC17.64■□□□□ 0.41
Clcn1Q64347 Gm45841-201ENSMUST00000207700 164 ntBASIC17.64■□□□□ 0.41
Clcn1Q64347 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.64■□□□□ 0.41
Clcn1Q64347 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.64■□□□□ 0.41
Clcn1Q64347 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.64■□□□□ 0.41
Clcn1Q64347 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn1Q64347 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm14660-201ENSMUST00000119809 575 ntBASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.63■□□□□ 0.41
Clcn1Q64347 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm27486-201ENSMUST00000184923 80 ntBASIC17.63■□□□□ 0.41
Clcn1Q64347 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm42693-201ENSMUST00000196779 631 ntBASIC17.63■□□□□ 0.41
Clcn1Q64347 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Clcn1Q64347 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn1Q64347 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms