Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC18.39■□□□□ 0.53
Gli3Q61602 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC18.39■□□□□ 0.53
Gli3Q61602 Gm38210-201ENSMUST00000191944 809 ntBASIC18.39■□□□□ 0.53
Gli3Q61602 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Gli3Q61602 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli3Q61602 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC18.39■□□□□ 0.53
Gli3Q61602 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli3Q61602 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.39■□□□□ 0.53
Gli3Q61602 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli3Q61602 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.39■□□□□ 0.53
Gli3Q61602 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gli3Q61602 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC18.39■□□□□ 0.53
Gli3Q61602 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gli3Q61602 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm6447-201ENSMUST00000118905 835 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC18.38■□□□□ 0.53
Gli3Q61602 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Gli3Q61602 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm7003-201ENSMUST00000195089 312 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 AC122305.4-201ENSMUST00000216159 1206 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gli3Q61602 n-R5s77-201ENSMUST00000083757 119 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Gli3Q61602 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC18.38■□□□□ 0.53
Gli3Q61602 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Gli3Q61602 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gli3Q61602 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC18.38■□□□□ 0.53
Gli3Q61602 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.38■□□□□ 0.53
Gli3Q61602 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Gli3Q61602 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Gli3Q61602 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.37■□□□□ 0.53
Gli3Q61602 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.37■□□□□ 0.53
Gli3Q61602 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18.37■□□□□ 0.53
Gli3Q61602 Gm37905-201ENSMUST00000195310 341 ntBASIC18.37■□□□□ 0.53
Gli3Q61602 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gli3Q61602 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gli3Q61602 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC18.36■□□□□ 0.53
Gli3Q61602 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Gm19353-201ENSMUST00000184561 445 ntBASIC18.36■□□□□ 0.53
Gli3Q61602 AC159819.2-201ENSMUST00000216151 342 ntBASIC18.36■□□□□ 0.53
Gli3Q61602 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC18.36■□□□□ 0.53
Gli3Q61602 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC18.36■□□□□ 0.53
Gli3Q61602 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gli3Q61602 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gli3Q61602 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gli3Q61602 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gli3Q61602 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli3Q61602 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC18.35■□□□□ 0.53
Gli3Q61602 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gli3Q61602 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gli3Q61602 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli3Q61602 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.35■□□□□ 0.53
Gli3Q61602 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gli3Q61602 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gli3Q61602 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms