Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Mre11Q61216 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Gm17807-201ENSMUST00000186869 298 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.74■□□□□ 0.27
Mre11Q61216 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mre11Q61216 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Mre11Q61216 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Mre11Q61216 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.73■□□□□ 0.27
Mre11Q61216 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Gm5682-201ENSMUST00000173402 505 ntBASIC16.73■□□□□ 0.27
Mre11Q61216 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.73■□□□□ 0.27
Mre11Q61216 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.73■□□□□ 0.27
Mre11Q61216 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Mre11Q61216 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mre11Q61216 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Mre11Q61216 Gm26616-202ENSMUST00000195676 3107 ntBASIC16.72■□□□□ 0.27
Mre11Q61216 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.72■□□□□ 0.27
Mre11Q61216 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.72■□□□□ 0.27
Mre11Q61216 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.72■□□□□ 0.27
Mre11Q61216 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.72■□□□□ 0.27
Mre11Q61216 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.72■□□□□ 0.27
Mre11Q61216 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Mre11Q61216 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Mre11Q61216 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.72■□□□□ 0.27
Mre11Q61216 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mre11Q61216 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mre11Q61216 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mre11Q61216 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.71■□□□□ 0.27
Mre11Q61216 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
Mre11Q61216 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mre11Q61216 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm9103-201ENSMUST00000119371 405 ntBASIC16.71■□□□□ 0.27
Mre11Q61216 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.71■□□□□ 0.27
Mre11Q61216 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Mre11Q61216 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm2445-201ENSMUST00000182798 989 ntBASIC16.71■□□□□ 0.27
Mre11Q61216 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC16.71■□□□□ 0.27
Mre11Q61216 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.71■□□□□ 0.27
Mre11Q61216 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.71■□□□□ 0.27
Mre11Q61216 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mre11Q61216 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms