Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm5187-201ENSMUST00000117317 991 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm15770-201ENSMUST00000117498 584 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm26461-201ENSMUST00000175064 290 ntBASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.91■□□□□ 0.14
Ccdc88aQ5SNZ0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Mir7070-201ENSMUST00000183657 86 ntBASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm3961-201ENSMUST00000204425 994 ntBASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm8598-201ENSMUST00000221184 836 ntBASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ccdc88aQ5SNZ0 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ccdc88aQ5SNZ0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm22331-201ENSMUST00000158066 136 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.88■□□□□ 0.13
Ccdc88aQ5SNZ0 Gm40466-201ENSMUST00000212174 422 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms