Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Srrm1Q52KI8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm13612-201ENSMUST00000119276 390 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm11803-201ENSMUST00000119966 444 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm24196-201ENSMUST00000179161 110 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm43818-201ENSMUST00000200605 466 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm18027-201ENSMUST00000218947 619 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm45930-201ENSMUST00000221330 292 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Srrm1Q52KI8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Gm6983-201ENSMUST00000214912 628 ntBASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Srrm1Q52KI8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm13385-201ENSMUST00000121089 220 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm8927-201ENSMUST00000181978 981 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm3222-201ENSMUST00000071282 990 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Srrm1Q52KI8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms