Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Gm11478-201ENSMUST00000117851 599 ntBASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.11■□□□□ 0.17
Rc3h1Q4VGL6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rc3h1Q4VGL6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Gm11524-201ENSMUST00000119349 807 ntBASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Gm26464-201ENSMUST00000157094 305 ntBASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.09■□□□□ 0.17
Rc3h1Q4VGL6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rc3h1Q4VGL6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rc3h1Q4VGL6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rc3h1Q4VGL6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms