Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Pfdn4Q3UWL8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Acot6-202ENSMUST00000222921 3622 ntBASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Psmb5-202ENSMUST00000227257 622 ntBASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pfdn4Q3UWL8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Gm12260-201ENSMUST00000122447 411 ntBASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Gm5364-201ENSMUST00000216789 889 ntBASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pfdn4Q3UWL8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Gm12882-201ENSMUST00000121696 517 ntBASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Gm18737-201ENSMUST00000173594 937 ntBASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Gm27920-201ENSMUST00000183953 96 ntBASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn4Q3UWL8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms