Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shisa3Q3UPR0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Shisa3Q3UPR0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Shisa3Q3UPR0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gm5177-201ENSMUST00000183092 997 ntBASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gm10175-201ENSMUST00000086013 645 ntBASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shisa3Q3UPR0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gm4995-201ENSMUST00000117247 432 ntBASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gm44492-201ENSMUST00000197012 141 ntBASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gm2213-201ENSMUST00000197485 688 ntBASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shisa3Q3UPR0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa3Q3UPR0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms