Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rapgef1Q3UHC1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Mir8102-201ENSMUST00000184148 139 ntBASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Mir6977-201ENSMUST00000184960 64 ntBASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rapgef1Q3UHC1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rapgef1Q3UHC1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rapgef1Q3UHC1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rapgef1Q3UHC1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms