Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm37935-201ENSMUST00000192012 982 ntBASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm5779-201ENSMUST00000218467 910 ntBASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Dupd1-202ENSMUST00000224735 548 ntBASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Brf2Q3UAW9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Brf2Q3UAW9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Brf2Q3UAW9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms