Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smim6Q3U0I6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.83□□□□□ -0.68
Smim6Q3U0I6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim6Q3U0I6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm16026-204ENSMUST00000162652 683 ntBASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smim6Q3U0I6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smim6Q3U0I6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms