Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Mir8117-201ENSMUST00000184773 107 ntBASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ptchd3Q0EEE2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Gm17271-201ENSMUST00000165535 355 ntBASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Gm5264-201ENSMUST00000190584 848 ntBASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms