Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a2Q02788 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a2Q02788 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a2Q02788 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a2Q02788 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.93□□□□□ -0.18
Col6a2Q02788 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.93□□□□□ -0.18
Col6a2Q02788 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Gm5425-201ENSMUST00000214125 459 ntBASIC13.93□□□□□ -0.18
Col6a2Q02788 Gm7653-201ENSMUST00000214567 508 ntBASIC13.93□□□□□ -0.18
Col6a2Q02788 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a2Q02788 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a2Q02788 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.92□□□□□ -0.18
Col6a2Q02788 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.92□□□□□ -0.18
Col6a2Q02788 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Mir6392-201ENSMUST00000184924 108 ntBASIC13.92□□□□□ -0.18
Col6a2Q02788 Gm18624-201ENSMUST00000220966 658 ntBASIC13.92□□□□□ -0.18
Col6a2Q02788 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Gm15823-201ENSMUST00000064305 670 ntBASIC13.92□□□□□ -0.18
Col6a2Q02788 Gm6180-201ENSMUST00000065243 498 ntBASIC13.92□□□□□ -0.18
Col6a2Q02788 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.92□□□□□ -0.18
Col6a2Q02788 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col6a2Q02788 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col6a2Q02788 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Gm12490-201ENSMUST00000120255 560 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.91□□□□□ -0.18
Col6a2Q02788 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a2Q02788 Gm8515-201ENSMUST00000194852 576 ntBASIC13.91□□□□□ -0.18
Col6a2Q02788 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms