Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Scn1bP97952 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn1bP97952 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Scn1bP97952 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Scn1bP97952 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Scn1bP97952 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Gm24589-201ENSMUST00000116692 94 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44357-201ENSMUST00000195897 142 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm19658-201ENSMUST00000196231 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44367-201ENSMUST00000196836 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44350-201ENSMUST00000197197 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44390-201ENSMUST00000197533 144 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44313-201ENSMUST00000198018 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44486-201ENSMUST00000198508 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44314-201ENSMUST00000199263 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44394-201ENSMUST00000199558 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44484-201ENSMUST00000199873 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44466-201ENSMUST00000200264 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm44359-201ENSMUST00000200671 138 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Gm6376-201ENSMUST00000209407 580 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.76□□□□□ -0.37
Scn1bP97952 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1bP97952 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Scn1bP97952 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Scn1bP97952 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Scn1bP97952 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.76□□□□□ -0.37
Scn1bP97952 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Scn1bP97952 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Scn1bP97952 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Scn1bP97952 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Scn1bP97952 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn1bP97952 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn1bP97952 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn1bP97952 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.75□□□□□ -0.37
Scn1bP97952 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.75□□□□□ -0.37
Scn1bP97952 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Birc2-201ENSMUST00000054878 378 ntBASIC12.75□□□□□ -0.37
Scn1bP97952 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Scn1bP97952 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Scn1bP97952 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms