Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.88□□□□□ -0.35
Cacna1aP97445 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.88□□□□□ -0.35
Cacna1aP97445 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cacna1aP97445 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cacna1aP97445 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Gm12882-201ENSMUST00000121696 517 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1aP97445 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.87□□□□□ -0.35
Cacna1aP97445 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cacna1aP97445 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cacna1aP97445 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1aP97445 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Gm43094-201ENSMUST00000196549 921 ntBASIC12.86□□□□□ -0.35
Cacna1aP97445 Rps4l-202ENSMUST00000204242 789 ntBASIC12.86□□□□□ -0.35
Cacna1aP97445 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cacna1aP97445 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.86□□□□□ -0.35
Cacna1aP97445 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Cacna1aP97445 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Cacna1aP97445 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.86□□□□□ -0.35
Cacna1aP97445 Gm18473-201ENSMUST00000220543 868 ntBASIC12.86□□□□□ -0.35
Cacna1aP97445 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cacna1aP97445 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cacna1aP97445 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm6152-201ENSMUST00000151704 340 ntBASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm22334-201ENSMUST00000158070 133 ntBASIC12.85□□□□□ -0.35
Cacna1aP97445 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.85□□□□□ -0.35
Cacna1aP97445 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms