Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps45P97390 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Vps45P97390 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Vps45P97390 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps45P97390 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.44□□□□□ -0.1
Vps45P97390 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps45P97390 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps45P97390 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps45P97390 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.43□□□□□ -0.1
Vps45P97390 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps45P97390 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.43□□□□□ -0.1
Vps45P97390 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.43□□□□□ -0.1
Vps45P97390 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Vps45P97390 Gm12091-201ENSMUST00000146791 830 ntBASIC14.43□□□□□ -0.1
Vps45P97390 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.43□□□□□ -0.1
Vps45P97390 Shd-206ENSMUST00000225145 998 ntBASIC14.43□□□□□ -0.1
Vps45P97390 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Gm20445-201ENSMUST00000061905 565 ntBASIC14.43□□□□□ -0.1
Vps45P97390 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps45P97390 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Vps45P97390 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Vps45P97390 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps45P97390 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.42□□□□□ -0.1
Vps45P97390 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps45P97390 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vps45P97390 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vps45P97390 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps45P97390 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Mir1897-201ENSMUST00000122581 272 ntBASIC14.42□□□□□ -0.1
Vps45P97390 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.42□□□□□ -0.1
Vps45P97390 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.42□□□□□ -0.1
Vps45P97390 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Gm44719-201ENSMUST00000206404 149 ntBASIC14.42□□□□□ -0.1
Vps45P97390 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Vps45P97390 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps45P97390 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
Vps45P97390 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps45P97390 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps45P97390 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps45P97390 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps45P97390 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps45P97390 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms