Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SgcaP82350 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcaP82350 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Gm13418-201ENSMUST00000119097 944 ntBASIC11.72□□□□□ -0.53
SgcaP82350 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.72□□□□□ -0.53
SgcaP82350 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SgcaP82350 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.72□□□□□ -0.53
SgcaP82350 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.72□□□□□ -0.53
SgcaP82350 Gm2451-201ENSMUST00000199447 999 ntBASIC11.72□□□□□ -0.53
SgcaP82350 Gm10290-201ENSMUST00000200451 999 ntBASIC11.72□□□□□ -0.53
SgcaP82350 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
SgcaP82350 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcaP82350 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcaP82350 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcaP82350 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SgcaP82350 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
SgcaP82350 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.71□□□□□ -0.53
SgcaP82350 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.71□□□□□ -0.53
SgcaP82350 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
SgcaP82350 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.71□□□□□ -0.53
SgcaP82350 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.71□□□□□ -0.53
SgcaP82350 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Gm5682-201ENSMUST00000173402 505 ntBASIC11.71□□□□□ -0.53
SgcaP82350 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.71□□□□□ -0.53
SgcaP82350 Gm17807-201ENSMUST00000186869 298 ntBASIC11.71□□□□□ -0.53
SgcaP82350 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SgcaP82350 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SgcaP82350 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SgcaP82350 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
SgcaP82350 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SgcaP82350 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SgcaP82350 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SgcaP82350 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SgcaP82350 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms