Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SgcdP82347 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.99□□□□□ -0.33
SgcdP82347 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SgcdP82347 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcdP82347 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcdP82347 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SgcdP82347 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SgcdP82347 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.98□□□□□ -0.33
SgcdP82347 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SgcdP82347 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcdP82347 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.98□□□□□ -0.33
SgcdP82347 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.98□□□□□ -0.33
SgcdP82347 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.98□□□□□ -0.33
SgcdP82347 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.98□□□□□ -0.33
SgcdP82347 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcdP82347 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SgcdP82347 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SgcdP82347 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcdP82347 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.98□□□□□ -0.33
SgcdP82347 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.98□□□□□ -0.33
SgcdP82347 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.97□□□□□ -0.33
SgcdP82347 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SgcdP82347 Gm25927-201ENSMUST00000175058 117 ntBASIC12.97□□□□□ -0.33
SgcdP82347 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.97□□□□□ -0.33
SgcdP82347 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.97□□□□□ -0.33
SgcdP82347 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.97□□□□□ -0.33
SgcdP82347 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.97□□□□□ -0.33
SgcdP82347 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.97□□□□□ -0.33
SgcdP82347 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.97□□□□□ -0.33
SgcdP82347 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SgcdP82347 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SgcdP82347 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SgcdP82347 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.97□□□□□ -0.33
SgcdP82347 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SgcdP82347 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcdP82347 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SgcdP82347 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
SgcdP82347 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SgcdP82347 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.96□□□□□ -0.33
SgcdP82347 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcdP82347 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.96□□□□□ -0.33
SgcdP82347 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms