Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Gm14042-201ENSMUST00000120139 833 ntBASIC13.83□□□□□ -0.2
Crnkl1P63154 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Crnkl1P63154 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.83□□□□□ -0.2
Crnkl1P63154 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Crnkl1P63154 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.83□□□□□ -0.2
Crnkl1P63154 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.82□□□□□ -0.2
Crnkl1P63154 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.82□□□□□ -0.2
Crnkl1P63154 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.82□□□□□ -0.2
Crnkl1P63154 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.82□□□□□ -0.2
Crnkl1P63154 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Crnkl1P63154 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.82□□□□□ -0.2
Crnkl1P63154 Gm14140-201ENSMUST00000119999 995 ntBASIC13.82□□□□□ -0.2
Crnkl1P63154 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.82□□□□□ -0.2
Crnkl1P63154 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.82□□□□□ -0.2
Crnkl1P63154 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.82□□□□□ -0.2
Crnkl1P63154 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Crnkl1P63154 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Crnkl1P63154 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Crnkl1P63154 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.81□□□□□ -0.2
Crnkl1P63154 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.81□□□□□ -0.2
Crnkl1P63154 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.81□□□□□ -0.2
Crnkl1P63154 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.81□□□□□ -0.2
Crnkl1P63154 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.81□□□□□ -0.2
Crnkl1P63154 AW822252-206ENSMUST00000208904 237 ntBASIC13.81□□□□□ -0.2
Crnkl1P63154 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.81□□□□□ -0.2
Crnkl1P63154 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Crnkl1P63154 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Crnkl1P63154 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms