Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC8.13□□□□□ -1.11
Rps28P62858 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Rps28P62858 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC8.13□□□□□ -1.11
Rps28P62858 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Rps28P62858 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rps28P62858 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC8.13□□□□□ -1.11
Rps28P62858 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Rps28P62858 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rps28P62858 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.12□□□□□ -1.11
Rps28P62858 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC8.12□□□□□ -1.11
Rps28P62858 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Rps28P62858 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rps28P62858 Gm44401-201ENSMUST00000204462 2375 ntBASIC8.12□□□□□ -1.11
Rps28P62858 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Gm45677-201ENSMUST00000209975 1341 ntBASIC8.12□□□□□ -1.11
Rps28P62858 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rps28P62858 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rps28P62858 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Rps28P62858 AC122305.4-201ENSMUST00000216159 1206 ntBASIC8.12□□□□□ -1.11
Rps28P62858 AC155729.1-201ENSMUST00000227758 544 ntBASIC8.12□□□□□ -1.11
Rps28P62858 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rps28P62858 Gm9870-201ENSMUST00000063874 645 ntBASIC8.12□□□□□ -1.11
Rps28P62858 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Rps28P62858 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rps28P62858 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rps28P62858 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Rps28P62858 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Rps28P62858 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rps28P62858 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.12□□□□□ -1.11
Rps28P62858 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gm6211-201ENSMUST00000147973 4275 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms