Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.63□□□□□ -0.55
Lsm5P62322 Gm12895-201ENSMUST00000122214 226 ntBASIC11.63□□□□□ -0.55
Lsm5P62322 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.63□□□□□ -0.55
Lsm5P62322 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.63□□□□□ -0.55
Lsm5P62322 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.63□□□□□ -0.55
Lsm5P62322 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.63□□□□□ -0.55
Lsm5P62322 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.63□□□□□ -0.55
Lsm5P62322 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lsm5P62322 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lsm5P62322 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm5P62322 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm5P62322 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm5P62322 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lsm5P62322 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm5P62322 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm5P62322 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm25925-201ENSMUST00000158314 306 ntBASIC11.62□□□□□ -0.55
Lsm5P62322 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.62□□□□□ -0.55
Lsm5P62322 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.62□□□□□ -0.55
Lsm5P62322 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm5P62322 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lsm5P62322 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm5P62322 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.62□□□□□ -0.55
Lsm5P62322 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.62□□□□□ -0.55
Lsm5P62322 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm5P62322 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.61□□□□□ -0.55
Lsm5P62322 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lsm5P62322 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Lsm5P62322 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.61□□□□□ -0.55
Lsm5P62322 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lsm5P62322 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Lsm5P62322 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.61□□□□□ -0.55
Lsm5P62322 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Lsm5P62322 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Gm5682-201ENSMUST00000173402 505 ntBASIC11.61□□□□□ -0.55
Lsm5P62322 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Lsm5P62322 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms