Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sssca1P56873 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.29□□□□□ -0.6
Sssca1P56873 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Sssca1P56873 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Sssca1P56873 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.29□□□□□ -0.6
Sssca1P56873 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sssca1P56873 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sssca1P56873 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.28□□□□□ -0.6
Sssca1P56873 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.28□□□□□ -0.6
Sssca1P56873 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sssca1P56873 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.28□□□□□ -0.6
Sssca1P56873 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sssca1P56873 Gm27920-201ENSMUST00000183953 96 ntBASIC11.28□□□□□ -0.6
Sssca1P56873 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.28□□□□□ -0.6
Sssca1P56873 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.28□□□□□ -0.6
Sssca1P56873 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sssca1P56873 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.28□□□□□ -0.6
Sssca1P56873 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Sssca1P56873 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.28□□□□□ -0.6
Sssca1P56873 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sssca1P56873 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sssca1P56873 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sssca1P56873 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.27□□□□□ -0.6
Sssca1P56873 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sssca1P56873 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
Sssca1P56873 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sssca1P56873 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sssca1P56873 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sssca1P56873 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.27□□□□□ -0.61
Sssca1P56873 Gm12350-201ENSMUST00000121208 462 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 Gm12882-201ENSMUST00000121696 517 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.27□□□□□ -0.61
Sssca1P56873 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sssca1P56873 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms