Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm13884-201ENSMUST00000118103 829 ntBASIC13.1□□□□□ -0.31
Sox2P48432 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.1□□□□□ -0.31
Sox2P48432 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox2P48432 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.1□□□□□ -0.31
Sox2P48432 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox2P48432 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.1□□□□□ -0.31
Sox2P48432 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Sox2P48432 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Sox2P48432 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.09□□□□□ -0.31
Sox2P48432 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox2P48432 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.09□□□□□ -0.31
Sox2P48432 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox2P48432 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox2P48432 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox2P48432 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox2P48432 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.09□□□□□ -0.31
Sox2P48432 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox2P48432 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox2P48432 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox2P48432 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox2P48432 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox2P48432 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox2P48432 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Sox2P48432 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.08□□□□□ -0.32
Sox2P48432 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox2P48432 Gm27920-201ENSMUST00000183953 96 ntBASIC13.08□□□□□ -0.32
Sox2P48432 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.08□□□□□ -0.32
Sox2P48432 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.08□□□□□ -0.32
Sox2P48432 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.08□□□□□ -0.32
Sox2P48432 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sox2P48432 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.08□□□□□ -0.32
Sox2P48432 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox2P48432 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.07□□□□□ -0.32
Sox2P48432 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.07□□□□□ -0.32
Sox2P48432 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sox2P48432 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox2P48432 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox2P48432 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sox2P48432 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox2P48432 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sox2P48432 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sox2P48432 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms