Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.09□□□□□ -0.47
TgfaP48030 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.09□□□□□ -0.47
TgfaP48030 Gm27514-201ENSMUST00000183692 110 ntBASIC12.09□□□□□ -0.47
TgfaP48030 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.09□□□□□ -0.47
TgfaP48030 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TgfaP48030 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.09□□□□□ -0.47
TgfaP48030 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.08□□□□□ -0.47
TgfaP48030 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TgfaP48030 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
TgfaP48030 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.08□□□□□ -0.47
TgfaP48030 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TgfaP48030 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TgfaP48030 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TgfaP48030 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.08□□□□□ -0.48
TgfaP48030 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.08□□□□□ -0.48
TgfaP48030 Gm42550-201ENSMUST00000201553 960 ntBASIC12.08□□□□□ -0.48
TgfaP48030 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.08□□□□□ -0.48
TgfaP48030 Gm18473-201ENSMUST00000220543 868 ntBASIC12.08□□□□□ -0.48
TgfaP48030 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.08□□□□□ -0.48
TgfaP48030 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
TgfaP48030 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.08□□□□□ -0.48
TgfaP48030 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TgfaP48030 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TgfaP48030 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TgfaP48030 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.07□□□□□ -0.48
TgfaP48030 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.07□□□□□ -0.48
TgfaP48030 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.07□□□□□ -0.48
TgfaP48030 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.07□□□□□ -0.48
TgfaP48030 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Gm18054-201ENSMUST00000207539 555 ntBASIC12.07□□□□□ -0.48
TgfaP48030 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.07□□□□□ -0.48
TgfaP48030 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.07□□□□□ -0.48
TgfaP48030 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.07□□□□□ -0.48
TgfaP48030 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TgfaP48030 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.07□□□□□ -0.48
TgfaP48030 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TgfaP48030 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.07□□□□□ -0.48
TgfaP48030 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms