Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.68■□□□□ 0.1
Sdc2P43407 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sdc2P43407 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sdc2P43407 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sdc2P43407 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Gm4995-201ENSMUST00000117247 432 ntBASIC15.67■□□□□ 0.1
Sdc2P43407 Gm13015-201ENSMUST00000118674 204 ntBASIC15.67■□□□□ 0.1
Sdc2P43407 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.67■□□□□ 0.1
Sdc2P43407 Mir1895-201ENSMUST00000122615 79 ntBASIC15.67■□□□□ 0.1
Sdc2P43407 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.67■□□□□ 0.1
Sdc2P43407 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sdc2P43407 AA619741-201ENSMUST00000195095 646 ntBASIC15.67■□□□□ 0.1
Sdc2P43407 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.67■□□□□ 0.1
Sdc2P43407 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.67■□□□□ 0.1
Sdc2P43407 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.67■□□□□ 0.1
Sdc2P43407 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Sdc2P43407 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sdc2P43407 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sdc2P43407 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.66■□□□□ 0.1
Sdc2P43407 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Sdc2P43407 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sdc2P43407 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sdc2P43407 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Sdc2P43407 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sdc2P43407 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Gm18049-201ENSMUST00000208909 581 ntBASIC15.66■□□□□ 0.1
Sdc2P43407 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Sdc2P43407 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.66■□□□□ 0.1
Sdc2P43407 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.66■□□□□ 0.1
Sdc2P43407 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sdc2P43407 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sdc2P43407 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sdc2P43407 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Sdc2P43407 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sdc2P43407 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sdc2P43407 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.65■□□□□ 0.1
Sdc2P43407 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.65■□□□□ 0.1
Sdc2P43407 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sdc2P43407 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 AA543401-201ENSMUST00000164248 1269 ntBASIC15.65■□□□□ 0.1
Sdc2P43407 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.65■□□□□ 0.1
Sdc2P43407 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.65■□□□□ 0.1
Sdc2P43407 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.65■□□□□ 0.1
Sdc2P43407 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sdc2P43407 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.65■□□□□ 0.1
Sdc2P43407 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sdc2P43407 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sdc2P43407 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms