Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Abca1P41233 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.64□□□□□ -0.55
Abca1P41233 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Gm37424-201ENSMUST00000191727 561 ntBASIC11.64□□□□□ -0.55
Abca1P41233 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.64□□□□□ -0.55
Abca1P41233 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.64□□□□□ -0.55
Abca1P41233 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Abca1P41233 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Abca1P41233 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.64□□□□□ -0.55
Abca1P41233 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Abca1P41233 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.64□□□□□ -0.55
Abca1P41233 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Abca1P41233 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Abca1P41233 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.63□□□□□ -0.55
Abca1P41233 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.63□□□□□ -0.55
Abca1P41233 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Abca1P41233 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Abca1P41233 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Abca1P41233 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Abca1P41233 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.63□□□□□ -0.55
Abca1P41233 Gm15678-201ENSMUST00000117573 960 ntBASIC11.63□□□□□ -0.55
Abca1P41233 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.63□□□□□ -0.55
Abca1P41233 Gm27731-201ENSMUST00000185192 107 ntBASIC11.63□□□□□ -0.55
Abca1P41233 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Abca1P41233 Gm19220-201ENSMUST00000222682 803 ntBASIC11.63□□□□□ -0.55
Abca1P41233 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Abca1P41233 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Abca1P41233 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.63□□□□□ -0.55
Abca1P41233 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Abca1P41233 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Abca1P41233 Gm12341-201ENSMUST00000119724 503 ntBASIC11.62□□□□□ -0.55
Abca1P41233 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.62□□□□□ -0.55
Abca1P41233 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.62□□□□□ -0.55
Abca1P41233 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.62□□□□□ -0.55
Abca1P41233 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.62□□□□□ -0.55
Abca1P41233 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Gm13226-201ENSMUST00000117838 404 ntBASIC11.62□□□□□ -0.55
Abca1P41233 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.62□□□□□ -0.55
Abca1P41233 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Abca1P41233 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Gm10766-202ENSMUST00000194123 606 ntBASIC11.62□□□□□ -0.55
Abca1P41233 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Abca1P41233 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Abca1P41233 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Abca1P41233 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms