Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.27□□□□□ -0.45
Upk2P38575 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.27□□□□□ -0.45
Upk2P38575 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.27□□□□□ -0.45
Upk2P38575 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk2P38575 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Upk2P38575 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Upk2P38575 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Upk2P38575 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Gm15460-201ENSMUST00000118147 391 ntBASIC12.26□□□□□ -0.45
Upk2P38575 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Gm9229-201ENSMUST00000222777 126 ntBASIC12.26□□□□□ -0.45
Upk2P38575 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.26□□□□□ -0.45
Upk2P38575 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk2P38575 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Upk2P38575 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk2P38575 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.25□□□□□ -0.45
Upk2P38575 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Gm22175-201ENSMUST00000175007 78 ntBASIC12.25□□□□□ -0.45
Upk2P38575 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk2P38575 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk2P38575 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk2P38575 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk2P38575 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk2P38575 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Upk2P38575 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Upk2P38575 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Upk2P38575 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Upk2P38575 Gm46209-201ENSMUST00000217912 553 ntBASIC12.24□□□□□ -0.45
Upk2P38575 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms