Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox5P35710 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.25■□□□□ 0.03
Sox5P35710 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox5P35710 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox5P35710 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox5P35710 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Sox5P35710 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Sox5P35710 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Gm13823-201ENSMUST00000119930 345 ntBASIC15.24■□□□□ 0.03
Sox5P35710 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Gm17271-201ENSMUST00000165535 355 ntBASIC15.24■□□□□ 0.03
Sox5P35710 Gm38225-201ENSMUST00000194001 393 ntBASIC15.24■□□□□ 0.03
Sox5P35710 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox5P35710 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox5P35710 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Sox5P35710 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox5P35710 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox5P35710 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox5P35710 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.23■□□□□ 0.03
Sox5P35710 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox5P35710 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox5P35710 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sox5P35710 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sox5P35710 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.22■□□□□ 0.03
Sox5P35710 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sox5P35710 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox5P35710 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Sox5P35710 AA619741-201ENSMUST00000195095 646 ntBASIC15.22■□□□□ 0.03
Sox5P35710 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sox5P35710 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.22■□□□□ 0.03
Sox5P35710 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox5P35710 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms