Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc6a1P31648 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.03□□□□□ -0.48
Slc6a1P31648 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.02□□□□□ -0.48
Slc6a1P31648 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.02□□□□□ -0.48
Slc6a1P31648 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a1P31648 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a1P31648 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a1P31648 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Slc6a1P31648 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Slc6a1P31648 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.02□□□□□ -0.49
Slc6a1P31648 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.02□□□□□ -0.49
Slc6a1P31648 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.02□□□□□ -0.49
Slc6a1P31648 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Slc6a1P31648 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Slc6a1P31648 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Gm9727-201ENSMUST00000161387 555 ntBASIC12.01□□□□□ -0.49
Slc6a1P31648 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Gm2756-201ENSMUST00000195851 400 ntBASIC12.01□□□□□ -0.49
Slc6a1P31648 Gm7787-201ENSMUST00000216858 688 ntBASIC12.01□□□□□ -0.49
Slc6a1P31648 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Slc6a1P31648 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.01□□□□□ -0.49
Slc6a1P31648 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Slc6a1P31648 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12□□□□□ -0.49
Slc6a1P31648 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12□□□□□ -0.49
Slc6a1P31648 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12□□□□□ -0.49
Slc6a1P31648 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Slc6a1P31648 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms