Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxd8P23463 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxd8P23463 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.33□□□□□ -0.11
Hoxd8P23463 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxd8P23463 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxd8P23463 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.33□□□□□ -0.12
Hoxd8P23463 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Gm23931-201ENSMUST00000103842 109 ntBASIC14.33□□□□□ -0.12
Hoxd8P23463 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.33□□□□□ -0.12
Hoxd8P23463 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Gm8062-201ENSMUST00000139696 444 ntBASIC14.33□□□□□ -0.12
Hoxd8P23463 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hoxd8P23463 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hoxd8P23463 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Gm8810-201ENSMUST00000172895 754 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Gm27514-201ENSMUST00000183692 110 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Gm27331-201ENSMUST00000183705 60 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Gm29608-201ENSMUST00000190444 463 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Gm26315-201ENSMUST00000083890 321 ntBASIC14.32□□□□□ -0.12
Hoxd8P23463 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Hoxd8P23463 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hoxd8P23463 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Gm43818-201ENSMUST00000200605 466 ntBASIC14.31□□□□□ -0.12
Hoxd8P23463 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.31□□□□□ -0.12
Hoxd8P23463 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.31□□□□□ -0.12
Hoxd8P23463 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.31□□□□□ -0.12
Hoxd8P23463 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxd8P23463 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms