Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm25948-201ENSMUST00000175334 112 ntBASIC13.19□□□□□ -0.3
TP20293 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.19□□□□□ -0.3
TP20293 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.19□□□□□ -0.3
TP20293 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TP20293 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TP20293 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TP20293 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.18□□□□□ -0.3
TP20293 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.18□□□□□ -0.3
TP20293 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Gm6415-201ENSMUST00000118488 348 ntBASIC13.18□□□□□ -0.3
TP20293 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.18□□□□□ -0.3
TP20293 Gm9719-201ENSMUST00000162765 543 ntBASIC13.18□□□□□ -0.3
TP20293 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Gm27430-201ENSMUST00000184585 107 ntBASIC13.18□□□□□ -0.3
TP20293 Gm44333-201ENSMUST00000197168 107 ntBASIC13.18□□□□□ -0.3
TP20293 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.18□□□□□ -0.3
TP20293 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TP20293 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.18□□□□□ -0.3
TP20293 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TP20293 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TP20293 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TP20293 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.18□□□□□ -0.3
TP20293 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TP20293 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TP20293 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TP20293 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.17□□□□□ -0.3
TP20293 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Gm13616-201ENSMUST00000120600 222 ntBASIC13.17□□□□□ -0.3
TP20293 Gm12882-201ENSMUST00000121696 517 ntBASIC13.17□□□□□ -0.3
TP20293 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TP20293 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.17□□□□□ -0.3
TP20293 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.17□□□□□ -0.3
TP20293 Gm28630-201ENSMUST00000187806 498 ntBASIC13.17□□□□□ -0.3
TP20293 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TP20293 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TP20293 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
TP20293 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.17□□□□□ -0.3
TP20293 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TP20293 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TP20293 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TP20293 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TP20293 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms