Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ccl1P10146 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Ccl1P10146 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl1P10146 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.82□□□□□ -0.68
Ccl1P10146 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccl1P10146 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl1P10146 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Gm23634-201ENSMUST00000175071 91 ntBASIC10.82□□□□□ -0.68
Ccl1P10146 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC10.82□□□□□ -0.68
Ccl1P10146 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.82□□□□□ -0.68
Ccl1P10146 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl1P10146 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl1P10146 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ccl1P10146 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.82□□□□□ -0.68
Ccl1P10146 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl1P10146 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.82□□□□□ -0.68
Ccl1P10146 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl1P10146 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ccl1P10146 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.81□□□□□ -0.68
Ccl1P10146 AA414768-201ENSMUST00000121924 1257 ntBASIC10.81□□□□□ -0.68
Ccl1P10146 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.81□□□□□ -0.68
Ccl1P10146 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccl1P10146 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.81□□□□□ -0.68
Ccl1P10146 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.81□□□□□ -0.68
Ccl1P10146 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ccl1P10146 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ccl1P10146 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ccl1P10146 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl1P10146 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl1P10146 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl1P10146 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms