Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
PtcraP0C6B2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.14□□□□□ -0.47
PtcraP0C6B2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Mir698-201ENSMUST00000102164 109 ntBASIC12.14□□□□□ -0.47
PtcraP0C6B2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.14□□□□□ -0.47
PtcraP0C6B2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
PtcraP0C6B2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.13□□□□□ -0.47
PtcraP0C6B2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.13□□□□□ -0.47
PtcraP0C6B2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PtcraP0C6B2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Gm6912-201ENSMUST00000117218 544 ntBASIC12.12□□□□□ -0.47
PtcraP0C6B2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.12□□□□□ -0.47
PtcraP0C6B2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.12□□□□□ -0.47
PtcraP0C6B2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.12□□□□□ -0.47
PtcraP0C6B2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms