Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.98■□□□□ 0.47
Hoxc9P09633 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hoxc9P09633 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.97■□□□□ 0.47
Hoxc9P09633 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hoxc9P09633 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hoxc9P09633 Gm4271-201ENSMUST00000174444 973 ntBASIC17.97■□□□□ 0.47
Hoxc9P09633 Gm27682-201ENSMUST00000183930 110 ntBASIC17.97■□□□□ 0.47
Hoxc9P09633 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.97■□□□□ 0.47
Hoxc9P09633 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.97■□□□□ 0.47
Hoxc9P09633 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hoxc9P09633 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hoxc9P09633 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.96■□□□□ 0.47
Hoxc9P09633 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.96■□□□□ 0.47
Hoxc9P09633 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.96■□□□□ 0.47
Hoxc9P09633 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Gm7399-201ENSMUST00000032395 858 ntBASIC17.96■□□□□ 0.47
Hoxc9P09633 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hoxc9P09633 Olfr582-201ENSMUST00000098212 960 ntBASIC17.96■□□□□ 0.47
Hoxc9P09633 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hoxc9P09633 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Hoxc9P09633 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hoxc9P09633 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.95■□□□□ 0.46
Hoxc9P09633 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.95■□□□□ 0.46
Hoxc9P09633 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.95■□□□□ 0.46
Hoxc9P09633 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.95■□□□□ 0.46
Hoxc9P09633 Gm38144-201ENSMUST00000192790 465 ntBASIC17.95■□□□□ 0.46
Hoxc9P09633 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.95■□□□□ 0.46
Hoxc9P09633 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hoxc9P09633 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hoxc9P09633 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.94■□□□□ 0.46
Hoxc9P09633 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms