Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01878 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
P01878 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
P01878 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
P01878 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01878 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01878 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01878 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01878 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P01878 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
P01878 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P01878 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.27□□□□□ -0.12
P01878 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.27□□□□□ -0.13
P01878 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.27□□□□□ -0.13
P01878 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.27□□□□□ -0.13
P01878 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
P01878 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.27□□□□□ -0.13
P01878 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.27□□□□□ -0.13
P01878 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P01878 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.26□□□□□ -0.13
P01878 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.26□□□□□ -0.13
P01878 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
P01878 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.26□□□□□ -0.13
P01878 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.26□□□□□ -0.13
P01878 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.26□□□□□ -0.13
P01878 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.26□□□□□ -0.13
P01878 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.26□□□□□ -0.13
P01878 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P01878 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.26□□□□□ -0.13
P01878 Gm43818-201ENSMUST00000200605 466 ntBASIC14.26□□□□□ -0.13
P01878 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
P01878 Itm2b-204ENSMUST00000228637 783 ntBASIC14.26□□□□□ -0.13
P01878 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.26□□□□□ -0.13
P01878 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
P01878 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
P01878 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01878 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.25□□□□□ -0.13
P01878 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
P01878 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
P01878 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.25□□□□□ -0.13
P01878 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.25□□□□□ -0.13
P01878 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.25□□□□□ -0.13
P01878 Gm29705-201ENSMUST00000212598 474 ntBASIC14.25□□□□□ -0.13
P01878 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
P01878 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P01878 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01878 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms