Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Gm10819-201ENSMUST00000099988 561 ntBASIC14.4□□□□□ -0.1
CopeO89079 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CopeO89079 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CopeO89079 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CopeO89079 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.4□□□□□ -0.1
CopeO89079 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CopeO89079 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CopeO89079 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.39□□□□□ -0.11
CopeO89079 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.39□□□□□ -0.11
CopeO89079 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.39□□□□□ -0.11
CopeO89079 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.39□□□□□ -0.11
CopeO89079 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CopeO89079 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CopeO89079 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CopeO89079 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CopeO89079 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.39□□□□□ -0.11
CopeO89079 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CopeO89079 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Gm25925-201ENSMUST00000158314 306 ntBASIC14.38□□□□□ -0.11
CopeO89079 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Gm2445-201ENSMUST00000182798 989 ntBASIC14.38□□□□□ -0.11
CopeO89079 Gm44492-201ENSMUST00000197012 141 ntBASIC14.38□□□□□ -0.11
CopeO89079 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.38□□□□□ -0.11
CopeO89079 Gm18041-201ENSMUST00000218210 618 ntBASIC14.38□□□□□ -0.11
CopeO89079 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.38□□□□□ -0.11
CopeO89079 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.38□□□□□ -0.11
CopeO89079 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms