Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cops4O88544 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cops4O88544 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.91□□□□□ -0.34
Cops4O88544 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cops4O88544 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Cops4O88544 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.9□□□□□ -0.34
Cops4O88544 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cops4O88544 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.9□□□□□ -0.34
Cops4O88544 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.9□□□□□ -0.34
Cops4O88544 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.9□□□□□ -0.34
Cops4O88544 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.9□□□□□ -0.34
Cops4O88544 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.9□□□□□ -0.34
Cops4O88544 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cops4O88544 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Cops4O88544 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.89□□□□□ -0.35
Cops4O88544 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cops4O88544 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.89□□□□□ -0.35
Cops4O88544 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cops4O88544 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cops4O88544 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Gm12350-201ENSMUST00000121208 462 ntBASIC12.89□□□□□ -0.35
Cops4O88544 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.89□□□□□ -0.35
Cops4O88544 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.89□□□□□ -0.35
Cops4O88544 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.89□□□□□ -0.35
Cops4O88544 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.89□□□□□ -0.35
Cops4O88544 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.89□□□□□ -0.35
Cops4O88544 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.89□□□□□ -0.35
Cops4O88544 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.89□□□□□ -0.35
Cops4O88544 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.89□□□□□ -0.35
Cops4O88544 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.89□□□□□ -0.35
Cops4O88544 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cops4O88544 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Cops4O88544 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Cops4O88544 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cops4O88544 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Cops4O88544 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.88□□□□□ -0.35
Cops4O88544 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cops4O88544 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cops4O88544 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.88□□□□□ -0.35
Cops4O88544 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms