Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.7■□□□□ 0.1
Stx1aO35526 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.7■□□□□ 0.1
Stx1aO35526 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stx1aO35526 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stx1aO35526 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stx1aO35526 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Stx1aO35526 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stx1aO35526 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Stx1aO35526 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Stx1aO35526 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stx1aO35526 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Stx1aO35526 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.7■□□□□ 0.1
Stx1aO35526 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.69■□□□□ 0.1
Stx1aO35526 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.69■□□□□ 0.1
Stx1aO35526 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.69■□□□□ 0.1
Stx1aO35526 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Stx1aO35526 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Stx1aO35526 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.69■□□□□ 0.1
Stx1aO35526 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.69■□□□□ 0.1
Stx1aO35526 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Stx1aO35526 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Stx1aO35526 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.68■□□□□ 0.1
Stx1aO35526 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.68■□□□□ 0.1
Stx1aO35526 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Stx1aO35526 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Stx1aO35526 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Stx1aO35526 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Stx1aO35526 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Stx1aO35526 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.67■□□□□ 0.1
Stx1aO35526 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.67■□□□□ 0.1
Stx1aO35526 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.67■□□□□ 0.1
Stx1aO35526 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.67■□□□□ 0.1
Stx1aO35526 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.67■□□□□ 0.1
Stx1aO35526 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Stx1aO35526 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.67■□□□□ 0.1
Stx1aO35526 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Stx1aO35526 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Stx1aO35526 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.66■□□□□ 0.1
Stx1aO35526 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms