Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Efnb3O35393 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.05□□□□□ -0.64
Efnb3O35393 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Efnb3O35393 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.05□□□□□ -0.64
Efnb3O35393 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Efnb3O35393 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.05□□□□□ -0.64
Efnb3O35393 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Efnb3O35393 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gm5479-201ENSMUST00000160578 435 ntBASIC11.05□□□□□ -0.64
Efnb3O35393 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gm18206-201ENSMUST00000207027 926 ntBASIC11.05□□□□□ -0.64
Efnb3O35393 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Efnb3O35393 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.05□□□□□ -0.64
Efnb3O35393 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Efnb3O35393 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Efnb3O35393 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Efnb3O35393 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Efnb3O35393 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.04□□□□□ -0.64
Efnb3O35393 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.04□□□□□ -0.64
Efnb3O35393 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.04□□□□□ -0.64
Efnb3O35393 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.04□□□□□ -0.64
Efnb3O35393 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.04□□□□□ -0.64
Efnb3O35393 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.04□□□□□ -0.64
Efnb3O35393 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.04□□□□□ -0.64
Efnb3O35393 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Efnb3O35393 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Efnb3O35393 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Efnb3O35393 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms