Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Trove2O08848 Gm14042-201ENSMUST00000120139 833 ntBASIC14.35□□□□□ -0.11
Trove2O08848 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trove2O08848 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trove2O08848 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.35□□□□□ -0.11
Trove2O08848 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trove2O08848 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.35□□□□□ -0.11
Trove2O08848 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.35□□□□□ -0.11
Trove2O08848 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.35□□□□□ -0.11
Trove2O08848 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.35□□□□□ -0.11
Trove2O08848 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.35□□□□□ -0.11
Trove2O08848 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trove2O08848 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trove2O08848 Gm9727-201ENSMUST00000161387 555 ntBASIC14.34□□□□□ -0.11
Trove2O08848 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.34□□□□□ -0.11
Trove2O08848 Gm5177-201ENSMUST00000183092 997 ntBASIC14.34□□□□□ -0.11
Trove2O08848 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Gm18206-201ENSMUST00000207027 926 ntBASIC14.34□□□□□ -0.11
Trove2O08848 Gm18041-201ENSMUST00000218210 618 ntBASIC14.34□□□□□ -0.11
Trove2O08848 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trove2O08848 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trove2O08848 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Trove2O08848 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.34□□□□□ -0.11
Trove2O08848 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trove2O08848 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trove2O08848 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trove2O08848 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trove2O08848 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trove2O08848 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trove2O08848 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.33□□□□□ -0.11
Trove2O08848 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trove2O08848 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trove2O08848 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trove2O08848 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.33□□□□□ -0.12
Trove2O08848 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.33□□□□□ -0.12
Trove2O08848 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.33□□□□□ -0.12
Trove2O08848 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.33□□□□□ -0.12
Trove2O08848 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trove2O08848 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.33□□□□□ -0.12
Trove2O08848 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.33□□□□□ -0.12
Trove2O08848 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.33□□□□□ -0.12
Trove2O08848 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trove2O08848 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trove2O08848 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trove2O08848 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trove2O08848 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trove2O08848 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms