Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tcof1O08784 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcof1O08784 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcof1O08784 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tcof1O08784 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tcof1O08784 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.32■□□□□ 0.2
Tcof1O08784 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Tcof1O08784 Gm14127-201ENSMUST00000117906 678 ntBASIC16.32■□□□□ 0.2
Tcof1O08784 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.32■□□□□ 0.2
Tcof1O08784 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.32■□□□□ 0.2
Tcof1O08784 Gm28631-201ENSMUST00000190740 334 ntBASIC16.32■□□□□ 0.2
Tcof1O08784 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.32■□□□□ 0.2
Tcof1O08784 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Tcof1O08784 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.32■□□□□ 0.2
Tcof1O08784 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tcof1O08784 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.32■□□□□ 0.2
Tcof1O08784 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Tcof1O08784 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Tcof1O08784 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Tcof1O08784 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Tcof1O08784 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcof1O08784 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.31■□□□□ 0.2
Tcof1O08784 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Tcof1O08784 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.31■□□□□ 0.2
Tcof1O08784 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Tcof1O08784 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.31■□□□□ 0.2
Tcof1O08784 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.31■□□□□ 0.2
Tcof1O08784 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Tcof1O08784 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tcof1O08784 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tcof1O08784 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tcof1O08784 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tcof1O08784 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcof1O08784 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.3■□□□□ 0.2
Tcof1O08784 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Tcof1O08784 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.3■□□□□ 0.2
Tcof1O08784 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Tcof1O08784 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.3■□□□□ 0.2
Tcof1O08784 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Tcof1O08784 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcof1O08784 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Tcof1O08784 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tcof1O08784 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcof1O08784 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tcof1O08784 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.29■□□□□ 0.2
Tcof1O08784 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcof1O08784 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcof1O08784 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcof1O08784 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms